Currents
Momentum
Could Shipworms Hold a Key to New Antibiotics?

Driftwood showing extensive boring by wood-eating shipworms. At ߲ݴý, assistant professor of pharmacy Bailey Miller has found that a symbiotic bacterium carried by shipworms produces metabolites that can be used in antibiotic therapies to treat dangerous infections.
A ߲ݴý pharmacy professor has found a compound in a marine symbiotic bacterium that kills a notoriously antibiotic-resistant bacterium responsible for serious, sometimes lethal, infections.
Scientists the world over are exploring natural environments in search of the next life-saving medications. At ߲ݴý, Bailey Miller, assistant professor of pharmacy, is exploring wood-eating shipworms and the symbiotic bacteria they carry. He has found that those bacteria produce metabolites that can be used in a therapeutic compound that kills Acinetobacter baumannii, a bacterium that can cause serious blood, urinary tract, and lung infections, especially in hospital settings.
“Acinetobacter baumannii is a very lethal infection that picks up resistance very easily and is very hard to kill,” says Miller, who began his research at the University of Utah before joining ߲ݴý in fall 2025. “We were able to find a compound made by these symbionts (marine shipworms and the symbiotic bacteria they carry) that effectively kills it. It works in animal models, not just in petri dishes. That’s one example of a compound that came from this system that shows a lot of promise.”
Miller harvests marine shipworms—not actual worms, but bivalve mollusks similar to clams—from wood found in the ocean, including from the nets of a fishing boat in Narragansett Bay. The mollusks bore into the wood, create a den, and eat the wood’s cellulose, which their symbiotic bacteria help them digest. Those bacteria produce metabolites, including turnercyclamycins, the chemical use for which Miller holds a federal patent as a co-creator.
In his own lab, along with a graduate student and three undergrads, Miller is working to identify and genetically engineer the bacterial strains harvested from the mollusks’ gills. Through genomic analysis, the team has found several species and strains of bacteria that encode the genes to produce potentially new antibiotics. Their engineering efforts are aimed at turning on these genes to overproduce their products and characterize their bioactivity.
The team has found several species and strains of bacteria that encode the genes to produce potentially new antibiotics.
“They’re all coming from shipworm symbionts. The more we sequence, the more of this potential we find,” says Miller, who previously worked with the Philippines Mollusk Symbiont International Cooperative Biodiversity Group, which focused largely on shipworms and their bacteria, spurring his research program. “There are hundreds of these new biosynthetic gene clusters, so there’s a whole lot of potential that we’ve not yet been able to isolate. We can do some genetic engineering to turn on these genes and see if they have some kind of utility—antibiotic, anticancer, anti-inflammatory properties. We’re looking to leverage biodiversity to find new drugs and trying to expand that research into new avenues.”
One offshoot of Miller’s original work has the potential to reduce environmental waste while developing valuable compounds. Miller has found that the beneficial bacteria can grow on wastepaper, eating the cellulose in paper and dissolving the waste.
“So, it’s this idea of doing waste valorization or green biotechnology,” Miller says. “Maybe we can produce a valuable antibiotic, and the main feedstock going into it is paper waste or corn husks. You add some sea water to the bacteria, mix with metals and minerals it needs, then put in wastepaper, and that paper will just dissolve. It’s a potential way of mitigating waste and turning it into something that adds value.”
—Patrick Luce ’99
Photo: Michael C. Rygel via Wikimedia Commons
